You're not the only person who gets weirded out by religious tones in films, Dom. Some people take it even worse.
Last summer I got out of a screening of Sunshine, the least religious movie you can see, and because of one line the "villain" says about God at the very end, this old white dude throws his hands up in the air, pissed off, as he walks out and says "Great! Another movie about a stupid [person] who talks to God!" I thought it was hilarious because just the word God pushed this old man over the edge. Imagine if the film actually contained a hint of pro-religious undertones? He might have exploded out of pure rage.